Ni Y, Qian L, Leal Siliceo S, Long X, Nychas E, Liu Y, Ismaiah M, Leung H, Zhang L, Gao Q, Wu Q, Zhang Y, Jia X, Liu S, Yuan R, Zhou L, Wang X, Li Q, Zhao Y, El-Nezami H, Xu A, Xu G, Li H, Panagiotou G, and Jia W (2023) Resistant starch decreases intrahepatic triglycerides in patients with NAFLD via gut microbiome alteration. Cell Metabolism, doi: https://doi.org/10.1016/j.cmet.2023.08.002.
pubmed

Chao YY, Puhach A, Drieser D, Arunkumar M, Lehner L, Seeholzer T, Garcia-Lopez A, van der Wal M, Fibi-Smetanda S, Dietschmann A, Sommermann T, Ćiković T, Taher L, Gresnigt MS, Vastert SJ, van Wijk F, Panagiotou G, Krappmann D, Groß O, Zielinski C (2023) Human T_H17 cells engage gasdermin E pores to release IL-1α on NLRP3 inflammasome activation. Nature Immunology, doi: 10.1038/s41561-022-00968-5.
pubmed

Gerst R, Cseresnyés Z, Figge MT (2023) JIPipe: visual batch processing for ImageJ. Nature Methods, doi: 10.1038/s41592-022-01744-4
pubmed

Götze S, Vij R, Burow K, Thome N, Urbat L, Schlosser N, Pflanze S, Müller R, Hänsch VG, Schlabach K, Fazlikhani L, Walther G, Dahse HM, Regestein L, Brunke S, Hube B, Hertweck C, Franken P, Stallforth P (2023) Ecological Niche-Inspired Genome Mining Leads to Discovery of Crop-Protecting Nonribosomal Lipopetides Featuring a Transient Amino Acid Building Block. J Am Chem Soc, doi: 10.1021/jacs.2c11107.
pubmed

Schwarz C, Eschenhagen P, Schmidt H, Hohnstein T, Iwert C, Frehn C, Roehmel J, Steinke E, Stahl M, Lozza L, Tikhonova E, Rosati E, Strevbo U, Babel N, Mainz JG, Wisplinghoff H, Ebel F, Jia LL, Blango MG, Hortschansky P, Brunke S, Hube B, Brakhage AA, Kniemeyer O, Scheffold A, Bacher P (2023) Antigen specifity and cross-reactivity drive functionally diverse anti-Aspergillus fumigatus T cell responses in cystic fibrosis. J Clin Invest, doi: 10.1172/JCI161593
pubmed

Orasch T, Gangapurwala G, Wollrath A, González K, Alex J, De San Luis A, Weber C, Hoeppener S, Cseresnyés Z, Figge MT, Guerrero-Sanchez C, Schubert US, Brakhage AA (2023). Polymer-based particles against pathogenic fungi: A non-uptake delivery of compounds. Biomater Adv, doi: 10.1016/j.bioadv.2023.213300.
pubmed

Petrollo S, De Giorgio F, Garello F, Bitonto V, Longo DL, Mercurio S, Ammirata G, Allocco AL, Fiorito V, Chiabrando D, Altruda F, Terreno E, Provero P, Munaron L, Genova T, Nóvoa A, Carlos AR, Cardoso S, Mallo M, Soares MP, Tolosan E (2023) Endothelial cells require functional FLVCR1a during developmental and adult angiogenesis. Angiogenesis, doi: 10.1007/s10456-023-09865-w.
pubmed

Günther M, Reimer C, Herbst R, Stallforth P (2022). Yellow polyketide pigment suppresses premature hatching in social amoeba. PNAS, doi: 119 (43) e2116122119
pubmed

Overholt WA, Trumbore S, Xu X, Bornemann TLV, Probst AJ, Krüger M, Herrmann M, Thamdrup B, Bristow LA, Taubert M, Schwab VF, Hölzer M, Marz M, Küsel K (2022). Carbon fixation in groundwater similar to those in oligotrophic marine systems. Nature Geoscience, doi: 10.1038/s41561-022-00968-5.
pubmed

Ramos S, Ademoloue, TW, Jentho E, Wu Q, Guerra J, Martins R, Pires G, Weis S, Carlos AR, Mahú I, Seixas E, Duarte D, Rajas F, Cardoso S, Sousa AGG, Lilue J, Paixao T, Mithieux G, Nogueira F, Soares MP (2022) A hypometabolic defense strategy against malaria. Cell Metabolism, doi: 10.1016/j.cmet.2022.06.011
pubmed

Gude F, Molloy E, Hoch T, Dell M, Dunbar K, Krabbe J, Groll M, Hertweck C (2022) A Specialized Polythioamide-Binding Protein Confers Antibiotic Self-Resistance in Anaerobic Bacteria, Angewandte Chemie, doi: 10.1002/anie.202206168.
pubmed

Stallforth P, Mittag M, Brakhage AA, Hertweck C, Hellmich UA (2022) Functional modulation of chemical mediators in microbial communities. Trends in Biochemical Sciences, doi: 10.1016/j.tibs.2022.07.006
pubmed

Ding Y, So B, Cao J, Wondraczek L (2022) Ultrasound-Induced Mechanoluminescence and Optical Thermometry Toward Stimulus-Responsive Materials with Simultaneous Trigger Response and Read-Out Functions. Advanced Science, doi: 10.1002/advs.202201631
pubmed

Zhu B, Wei D, Pohnert G (2022). The thermoacidophilic red alga Galdieria sulphuraria is a highly efficient cell factory for ammonium recovery from ultrahigh-NH4+ industrial effluent with co-production of high-protein biomass by photo-fermentation. Chemical Engineering Journal, doi: 10.1016/j.cej.2022.135598.
ScienceDirect

Alonso-Roman R, Last A, Mirhakkak MH, Sprague JL, Möller L, Großmann P, Graf K, Gratz R, Mogavero S, Vylkova S, Panagiotou G, Schäuble S, Hube B, Gresnigt MS (2022) Lactobacillus rhamnosus colonisation antagonizes Candida albicans by forcing metabolic adaptions that compromise pathogenicity. Nature Communications, doi: 10.1038/s41467-022-30661-5
pubmed

Leung H, Long X, Ni Y, Qian L, Nychas E, Leal Siliceo S, Pohl D, Hanhineva K, Liu Y, Xu A, Nielsen HB, Belda E, Clément K, Loomba R, Li H, Jia W, Panagiotou G (2022) Risk assessment with gut microbiome and metabolite markers in NAFLD development. Science Translational Medicine, doi: 10.1126/scitranslmed.abk0855
pubmed

De Almeida GP, Lichtner P, Eckstein G, Brinkschmidt T, Chu CF, Sun S, Reinhard J, Maedler SC, Kloeppel M, Verbeek M, Zielinski CE (2022) Human skin-resident host T cells can persist long term after allogeneic stem cell transplantation and maintain recirculation potential. Science Immunology, doi: 10.1126/sciimmunol.abe2634.
pubmed

Westman J, Plumb J, Licht A, Yang M, Allert S, Naglik JR, Hube B, Grinstein S, Maxson ME (2022) Calcium-dependent ESCRT recruitment and lysosome exocytosis maintain epithelial integrity during Candida albicans invasion. Cell Reports, doi: 10.1016/j.celrep.2021.110187.
pubmed

Deng Y, Vallet M, Pohnert G (2022) Temporal and spatial signaling mediating the balance of the plankton microbiome. Ann Rev Mar Sci, doi: 10.1146/annurev-marine-042021-012353.
pubmed

Traxler L, Shrestha J, Richter M, Krause K, Schäfer T, Kothe E (2021) Metal adaptation and transport in hyphae of the wood-rot fungus Schizophyllum commune. J Hazard Mater., doi: 10.1016/j.jhazmat.2021.127978 .
pubmed

Wu Y, Zeng Z, Guo Y, Song L, Weatherhead JE, Huang X, Zeng Y, Bimler L, Chang CY, Knight JM, Valladolid C, Sun H, Cruz MA, Hube B, Naglik JR, Luong AU, Kheradmand F, Corry DB (2021) Candida albicans elicits protective allergic responses via platelet mediated T helper 2 and T helper 17 cell polarization. Immunity, doi: 10.1016/j.immuni.2021.08.009.
pubmed

Marfil-Sánchez A, Zhang L, Alonso-Pernas P, Mirhakkak M, Mueller M, Seelbinder B, Ni Y, Santhanam R, Busch A, Beemelmanns C, Ermolaeva M, Bauer M, Panagiotou G (2021) An integrative understanding of the large metabolic shifts induced by antibiotics in critical illness. Gut Microbes, doi: 10.1080/19490976.2021.1993598.
pubmed

Taubert M, Overholt WA, Heinze BM, Matanfack GA, Houhou R, Jehmlich N, von Bergen M, Rösch P, Popp J, Küsel K (2021) Bolstering fitness via CO₂ fixation and organic carbon uptake: mixotrophs in modern groundwater. ISME J, doi: 10.1038/s41396-021-01163-x.
pubmed

Krespach M, Stroe MC, Flak M, Kornor AJ, Nietzsche S, Sasso S, Hertweck C, Brakhage AA (2021) Bacterial marginolactones trigger formation of algal gloeocapsoids, protective aggregates on the verge of multicellularity. PNAS, doi: 10.1073/pnas.2100892118.
pubmed - This work was funded by the CRC 1127

Jentho E, Ruiz-Moreno C, Novakovic B, Kourtzelis I, Megchelenbrink W, Martins R, Chavakis T, Soares MP, Kalafati L, Guerra J, Roestel F, Bohm P, Godmann M, Grinenko T, Eugster A, Beretta M, Joosten L, Netea M, Bauer M, Stunnberg H, Weis S (2021) Trained innate immunity, long-lasting epigenetic modulation, and skewed myelopoiesis by heme. PNAS, doi: 10.1073/pnas.2102698118.
pubmed

Venkat K, Hoyos M, Haycocks J, Cassidy L, Engelmann B, Rolle-Kampczyk U, von Bergen M, Tholey A, Grainger D, Papenfort K (2021) A dual-function RNA balances carbon uptake and central metabolism in Vibrio cholerae. EMBO J, doi: 10.15252/embj.2021108542.
pubmed

Büttner H, Niehs SP, Vandelannoote K, Cseresnyés Z, Dose B, Richter I, Gerst R, Figge MT, Stinear TP, Pidot SJ, Hertweck C (2021) Bacterial endosymbionts protect beneficial soil fungus from nematode attack. PNAS, doi: 10.1073/pnas.2110669118.
pubmed

Press AT, Babic P, Hoffmann B, Müller T, Foo W, Hauswald W, Benecke J, Beretta M, Cseresnyés Z, Hoeppener S, Nischang I, Coldewey SM, Gräler MH, Bauer R, Gonnert F, Gaßler N, Wetzker R, Figge MT, Schubert US, Bauer M (2021) Targeted delivery of a phosphoinositide 3-kinase y inhibitor to restore organ function in sepsis. EMBO Molecular Medicine, doi: 10.15252/emmm.202114436.
pubmed

Little RF, Hertweck C (2021) Chain release mechanisms in polyketide and non-ribosomal peptide biosynthesis. Natural Product Reports, doi: 10.1039/d1np00035g.
pubmed

Schmidt S, Kildgaard S, Guo HJ, Beemelmanns C, Poulsen M (2021) The chemical ecology of the fungus-farming termite symbiosis. Natural Product Reports, doi: 10.1039/d1np00022e.
pubmed

Scherlach K, Hertweck C (2021) Mining and unearthing hidden biosynthetic potential. Nature Communications, doi: 10.1038/s41467-021-24133-5.
pubmed

Zhang J, Ni Y, Qian L, Fang Q, Zheng T, Zhang M, Gao Q, Zhang Y, Ni J, Hou X, Bao Y, Kovatcheva Datchary P, Xu A, Li H, Panagiotou G, Jia W (2021) Decreased abundance of Akkermansia muciniphila leads to the impairment of insulin secretion and glucose homeostasis in lean type 2 diabetes. Advanced Science, doi: 10.1002/advs.202100536.
pubmed

Helk T, Berger E, Jamnuch S, Hoffmann L, Kabacinski A, Gautier J, Tissandier F, Goddet JP, Chang HT, Oh J, Pemmaraju CD, Pascal TA, Sebban S, Spielmann C, Zuerch M (2021) Table-top extreme ultraviolet second harmonic generation. Science Advances, doi: 10.1126/sciadv.abe2265.
pubmed

Ni Y, Lohinai Z, Heshiki Y, Dome B, Moldavy J, Dulka E, Galffy G, Berta J, Weiss GJ, Sommer MOA, Panagiotou G (2021) Distinct composition and metabolic functions of human gut microbiota are associated with cachexia in lung cancer patients. ISME J, doi: 10.1038/s41396-021-00998-8.
pubmed

Yan L, Hermans S, Totsche K, Lehmann R, Herrmann M, Küsel K (2021) Groundwater bacterial communities evolve over time in response to recharge. Water Research, doi: 10.1016/j.watres.2021.117290.
pubmed

Wibowo MC, Yang Z, Borry M, Hübner A, Huang KD, Tierney BT, Zimmerman S, Barajas Olomos F, Contreras Cubas C, García Ortiz H, Martínez Hernández A, Luber JM, Kirstahler P, Blohm T, Smiley FE, Arnold R, Ballal SA, Pamp SJ, Russ J, Maixner F, Rota Stabelli O, Segata N, Reinhard K, Orozco L, Warinner C, Snow M, LeBlanc S, Kostic AD (2021) Reconstruction of ancient microbial genomes from the human gut. Nature, doi: 10.1038/s41586-021-03532-0.
pubmed

Fellows Yates JA, Velsko IM, Aron F, Posth C, Hofman CA, Austin RM, Parker CE, Mann AE, Nägele K, Arthur JW, Bauer CC, Crevecoeur I, Cupillard C, Curtis MC, Dalén L, Diáz Zorita Bonilla M, Diéz Fernández Lomana JC, Drucker DG, Escribano Escrivá E, Francken M, Gibbon VE, González Morales MR, Grande Mateu A, Harvati K, Henry AG, Humphrey L, Menéndez M, Mihailovic D, Peresani M, Rodríguez Moroder S, Roksandic M, Rougier H, Sázelová S, Stock JT, Guy Straus L, Svoboda J, Teßmann B, Walker MJ, Power RC, Lewis CM, Sankaranarayanan K, Guschanski K, Wrangham RW, Dewhirst FE, Salazar García DC, Krause J, Herbig A, Warinner C (2021) The evolution and changing ecology of the African hominid oral microbiome. PNAS, doi: 10.1073/pnas.2021655118.
pubmed

Molloy EM, Dell M, Hänsch VG, Dunbar K, Feldmann R, Oberheide A, Seyfarth L, Kumpfmüller J, Horch T, Arndt HD, Hertweck C (2021) Enzyme-primed negative chemical ligation produces autoinducing cyclopeptides in Clostridia. Angew Chem Int Ed Engl, doi: 10.1002/anie.202016378.
pubmed

Gilaberte Basset M, Hochrainer A, Töpfer S, Riexinger F, Bickert P, León Torres JR, Steinlechner F, Gräfe M (2021) Video-Rate Imaging with Undetected Photons. Laser & Photonics Reviews, doi: 10.1002/lpor.202000327.
Wiley

Singh S, Thompson JA, Yilmaz B, Li H, Weis S, Sobral D, Truglio M, Aires da Silva F, Aguiar S, Carlos AR, Rebelo S, Cardoso S, Gjini E, Nuñez G, Soares MP (2021) Loss of α-gal during primate evolution enhanced antibody-effector function and resistance to bacterial sepsis. Cell Host Microbe S1931-3128(20)30680-6.
pubmed

Zhang S, Mukherji R, Chowdhury S, Reimer L, Stallforth P (2021) Lipopeptide-mediated bacterial interaction enables cooperative predator defense. PNAS 118(6):e2013759118.
pubmed

Schlembach I, Grünberger A, Rosenbaum MA, Regestein L (2021) Measurement Techniques to Resolve and Control Population Dynamics of Mixed-Culture Processes. Trends Biotechnol. S0167-7799(21)00012-3.
pubmed

Last A, Maurer M, Mosig AS, Gresnigt MS, Hube B (2021) In vitro infection models to study fungal-host interactions. FEMS Microbiol Rev, doi: 10.1093/femsre/fuab005.
pubmed

Russo AJ, Vasudevan SO, Méndez Huergo SP, Kumari P, Menoret A, Duduskar S, Wang C, Pérez Sáez JM, Fettis MM, Li C, Liu R, Wanchoo A, Chandiran K, Ruan J, Kailasan Vanaja SK, Bauer M, Sponholz C, Hudalla GA, Vella AT, Zhou B, Deshmukh SD, Rabinovich GA, Rathinam VA (2021) Intracellular immune sensing promotes inflammation via gasdermin D-driven release of a lectin alarmin. Nature Immunology, doi: 10.1038/s41590-020-00844-7.
pubmed

Neubacher N, Tobias NJ, Huber M, Cai X, Glatter T, Pidot SJ, Stinear TP, Lütticke AL, Papenfort K, Bode HB (2020) Symbiosis, virulence and natural-product biosynthesis in entomopathogenic bacteria are regualted by a small RNA. Nat Microbiol 5(12):1481-1489.
pubmed

Peschek N, Herzog R, Singh PK, Sprenger M, Meyer F, Fröhlich KS, Schröger L, Bramkamp M, Drescher K, Papenfort K (2020) RNA-mediated control of cell shape modulates antibiotic resistance in Vibrio cholerae. Nat Commun 11(1):6067.
pubmed

Flores DC, Fricke M, Wesp V, Desirò D, Kniewasser A, Hölzer M, Marz M, Mittag M (2020) A marine Chlamydomonas sp. emerging as an algal model. J Phycol 57(1):54-69.
pubmed

Borowiak M, Küllmer F, Gegenfurtner F, Peil S,  Nasufovic V, Zahler S, Thorn-Seshold O, Trauner D, Arndt HD (2020) Optical manipulation of F-Actin with photoswitchable small molecules. J Am Chem Soc 142(20):9240-9249.
pubmed

Rak LS, Schalk F, Schwitalla JW, Benndorf R, Vollmers J, Kaster AK, de Beer ZW, Park M, Ahn MJ, Jung WH, Beemelmanns C, Kim KH (2020) Polyhalogenation of isoflavonoids by the termite-associated Actinomadura sp. RB99. J Nat Prod 83(10):3102-3110.
pubmed

Seelbinder B, Chen J, Brunke S, Vazquez-Uribe R, Santhaman R, Meyer AC, Senne de Oliveira Lino F, Chan KF, Loos D, Imamovic L, Tsang CC, Puikin Lam R, Sridhar S,  Kang K, Hube B, Woo PC, Sommer MOA, Panagiotou G (2020) Antibiotics create a shift from mutualism to competetion in human gut communities with a longer lasting impact on fungi than bacteria. Microbiome 8(1):133.
pubmed

Azemtsop Matanfack G, Taubert M, Guo S, Houhou R, Bocklitz T, Küsel K, Popp J (2020) Influence of  carbon sources on quantification of deuterium incorporation in heterotrophic bacteria: a raman-stable isotope labeling approach. Analytical Chemistry 92(16):11429-11437.
pubmed

Hoyos M, Huber M, Förstner KU, Papenfort K (2020) Gene autoregulation by 3' UTR-derived bacterial small RNAs. eLife 9:e58836.
pubmed

Krespach MKC, García-Altares M, Flak M, Schoeler H, Scherlach K, Netzker T, Schmalzl A, Mattern DJ, Schroeckh V, Komor A, Mittag M, Hertweck C, Brakhage AA (2020) Lichen-like association of Chlamydomonas reinhardtii and Aspergillus nidulas protects algal cells from bacteria. ISME 14(11):2794-2805.
pubmed

Schmidt F, Thywißen A, Röcker M, Cunha C, Cseresnyés Z, Schmidt H, Galiani S, Gräler MH, Chamilos G, Lacerda JF, Campos AJ, Eggeling C, Figge MT, Heinekamp T, Filler SG, Carvalho A, Brakhage AA (2020) Flotillin-dependent lipid-raft microdomains are required for functional phagolysosomes against fungal infections. Cell Reports 32(7):108017.
pubmed

Kohn T, Rast P, Kallschuer N, Wiegand S, Boedeker C, Jetten MSM, Jeske O, Vollmers J, Kaster AK, Rohde M, Jogler M, Jogler C (2020) The microbiome of Posidonia oceania seagrass leaves can be dominated by planctomycetes. Front Microbiol 11:1458.
pubmed

Gao C, Fernandez VI, Lee KS, Fenizia S, Pohnert G, Seymour JR, Raina JB, Stocker R (2020) Single-cell bacterial transcription measurements reveal the importance of dimethylsulfoniopropionate (DMSP) hotspots in ocean sulfur cycling. Nat Commun 11(1):1942.
pubmed

Huber M, Fröhlich KS, Radmer J, Papenfort K (2020) Switching fatty acid metabolism by an RNA-controlled feed forward loop. PNAS 117(14):8044-8054.
pubmed

Heshiki Y, Vazquez-Uribe R, Li Ji, Ni Y, Quainoo S, Imamovic L, Li Ju, Sørensen M, Chow BKC, Weiss GJ, Xu A, Sommer MOA, Panagiotou G (2020) Predictable modulation of cancer treatment outcomes by the gut microbiota. Microbiome, doi: 10.1186/s40168-020-00811-2.
pubmed

Yan L, Herrmann M, Kampe B, Lehmann R, Totsche KU, Küsel K (2020) Environmental selection shapes the formation of near-surface groundwater microbiomes. Water Res 8(1):28.
pubmed

Deinhardt-Emmer S, Rennert K, Schicke E, Cseresnyés Z, Windolph M, Nietzsche S, Heller R, Siwczak F, Haupt KF, Carlstedt S, Schacke M, Figge MT, Ehrhardt C, Löffler B, Mosig AS (2020) Co-infection with Staphylococcus aureus after primary influenza virus infection leads to damage of the endothelium in a human alveolus-on-a-chip model. Biofabrication 12(2):025012.
pubmed

Niehs SP, Dose B, Richter S, Pidot SJ, Dahse HM, Stinear TP, Hertweck C (2020) Mining symbionts of a spider-transmitted fungus illuminates unchartered biosynthetic pathways to cytotoxic benzolactones. Angew Chem Int Ed Engl 59(20):7766-7771.
pubmed

Stroe MC, Netzker T, Scherlach K, Krüger T, Hertweck C, Valiante V, Brakhage AA (2020) Targeted induction of a silent fungal gene cluster encoding the bacteria-specific germination inhibitor fumigermin. eLife 9:e52541.
pubmed

Mukherji R, Zhang S, Chowdhury S, Stallforth P (2020) Chimeric LuxR transcription factors rewire natural product regulation. Angew Chem Int Ed 59(15):6192-6195.
pubmed

Maurer M, Gresnigt MS, Last A, Wollny T, Berlinghof F, Pospich R, Cseresnyes Z, Medyukhina A, Graf K, Gröger M, Raasch M, Siwczak F, Nietsch S, Jacobsen ID, Figge MT, Hube B, Huber O, Mosig AS (2019) A three-dimensional immunocompetent intestine-on-chip model as in vitro platform for functional and microbial interaction studies. Biomaterials 220:119396.
pubmed

Trottmann F, Franke J, Richter I, Ishida K, Cyrulies M, Dahse HM, Regestein L, Hertweck C (2019) Cyclopropanol warhead in malleicyprol confers virulence of human- and animal-pathogenic Burkholderia species. Angew Chem Int Ed 58(40): 14129-14133.
pubmed

Vallet M, Baumeister TUH, Kaftan F, Grabe V, Buaya A, Thines M, Svatoš A, Pohnert G (2019) The oomycete Lagenisma coscinodisci hijacks host alkaloid synthesis during infection of a marine diatom. Nat Commun 10(1): 4938.
pubmed

Wondraczek L, Pohnert G, Schacher FH, Köhler A, Gottschaldt M, Schubert US, Küsel K, Brakhage AA (2019) Artificial Microbial Arenas: Materials for Observing and Manipulating Microbial Consortia. Adv Mater 31(24):e1900284, doi: 10.1002/adma.201900284.
pubmed

Bacher P, Hohnstein T, Beerbaum E, Röcker M, Kaufmann S, Brandt C, Röhmel J, Stervbo U, Nienen M, Babel N, Milleck J, Assenmacher M, Cornely OA, Heine G, Worm M, Creutz P, Tabeling C, Ruwwe-Glösenkamp C, Sander LE, Brunke S, Hube B, Blango M, Kniemeyer O, Brakhage AA, Schwarz C, Scheffold A (2019) Human anti-fungal Th17 immunity and pathology rely on cross-reactivity against Candida albicans. Cell 176(6): 1340-1355.e15.
pubmed

Thume K, Gebser B, Chen L, Meyer N, Kieber DJ, Pohnert G (2018) The metabolite dimethylsulfoxonium propionate extends the marine organosulfur cycle. Nature 563: 412-5.
pubmed

Stappers MHT, Clark AE, Aimanianda V, Bidula S, Reid DM, Asamaphan P, Hardison SE, Dambuza IM, Valsecchi I, Kerscher B, Plato A, Wallace CA, Yuecel R, Hebecker B, da Glória Teixeira Sousa M, Cunha C, Liu Y, Feizi T, Brakhage AA, Kwon-Chung KJ, Gow NAR, Zanda M, Piras M, Zanato C, Jaeger M, Netea MG, van de Veerdonk FL, Lacerda JF, Campos A, Carvalho A, Willment JA, Latgé JP, Brown GD (2018) Recognition of DHN-melanin by a C-type lectin receptor is required for immunity to Aspergillus. Nature 555: 382-6
pubmed

Hermenau R, Ishida K, Gama S, Hoffmann B, Pfeifer-Leeg M, Plass W, Mohr JF, Wichard T, Saluz HP, Hertweck C (2018) Gramibactin is a bacterial siderophore with a diazeniumdiolate ligand system. Nat Chem Biol 14: 841-3.
pubmed

Vågene ÅJ, Herbig A, Campana MG, Robles García NM, Warinner C, Sabin S, Spyrou MA, Andrades Valtueña A, Huson D, Tuross N, Bos KI, Krause J (2018) Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico. Nat Ecol Evol 2: 520-8.
pubmed

Dunbar KL, Büttner H, Molloy EM, Dell M, Kumpfmüller J, Hertweck C (2018) Genome editing reveals novel thiotemplated assembly of polythioamide antibiotics in anaerobic bacteria. Angew Chem Int Ed 57: 14080-4.
pubmed

Englert C, Nischang I, Bader C, Borchers P, Alex J, Pröhl M, Hentschel M, Hartlieb M, Träger A, Pohnert G, Schubert S, Gottschaldt M, Schubert US (2018) Photocontrolled release of chemicals from nano- and microparticle containers. Angew Chem Int Ed 57: 2479-82.
pubmed

Santos AM, Ponjavic A, Fritzsche M, Fernandes RA, de la Serna JB, Wilcock MJ, Schneider F, Urbancic I, McColl J, Anzilotti C, Ganzinger KA, Aßmann M, Depoil D, Cornall RJ, Dustin ML, Klenerman D, Davis SJ, Eggeling C, Lee SF (2018) Capturing resting T cells: the perils of PLL. Nat Immunol 19: 203-5.
pubmed

Weis S, Carlos AR, Moita MR, Singh S, Blankenhaus B, Cardoso S, Larsen R, Rebelo S, Schauble S, Del Barrio L, Mithieux G, Rajas F, Lindig S, Bauer M, Soares MP (2017) Metabolic adaptation establishes disease tolerance to sepsis. Cell 169: 1263-75.
pubmed

Fritzsche M, Li D, Colin-York H, Chang VT, Moeendarbary E, Felce JH, Sezgin E, Charras G, Betzig E, Eggeling C (2017) Self-organizing actin patterns shape membrane architecture but not cell mechanics. Nat Commun 8: 14347.
pubmed

Aiyar P, Schaeme D, García-Altares M, Carrasco Flores D, Dathe H, Hertweck C, Sasso S, Mittag G (2017) Antagonistic bacteria disrupt calcium homeostasis and immobilize algal cells. Nat Commun 8: 1756.
pubmed

Sollapur R, Kartashov D, Zürch M, Hoffmann A, Grigorova T, Sauer G, Hartung A, Schwuchow A, Bierlich J, Kobelke J, Chemnitz M, Schmidt MA, Spielmann C (2017) Resonance-enhanced multi-octave supercontinuum generation in antiresonant hollow-core fibers. Light Sci Appl 6: e17124.
pubmed

Moyes DL, Wilson D, Richardson JP, Mogavero S, Tang SX, Wernecke J, Höfs S, Gratacap RL, Robbins J, Runglall M, Murciano C, Blagojevic M, Thavaraj S, Förster TM, Hebecker B, Kasper L, Vizcay G, Iancu SI, Kichik N, Häder A, Kurzai O, Luo T, Krüger T, Kniemeyer O, Cota E, Bader O, Wheeler RT, Gutsmann T, Hube B, Naglik JR (2016) Candidalysin is a fungal peptide toxin critical for mucosal infection. Nature 532: 64-8.
pubmed

Bacher P, Heinrich F, Stervbo U, Nienen M, Vahldieck M, Iwert C, Vogt K, Kollet J, Babel N, Sawitzki B, Schwarz C, Beereswill S, Heimesaat M, Heine G, Gadermaier G, Asam C, Assenmacher M, Kniemeyer O, Brakhage AA, Ferreira-Briza F, Wallner M, Worm M, Scheffold A (2016) Regulatory T cell specificity directs tolerance versus allergy against aeroantigens in humans. Cell 167: 1067-78.
pubmed

Beulig F, Urich T, Nowak M, Trumbore SE, Gleixner G, Gilfillan GD, Fjelland KE, Küsel K (2016) Altered carbon turnover processes and microbiomes in soils under long-term extremely high CO₂ exposure. Nat Microbiol 1: 15025.
pubmed

Winter S, Jahn K, Wehner S, Kuchenbecker L, Marz M, Stoye J, Böcker S (2016) Finding approximate gene clusters with Gecko 3. Nucleic Acids Res 44: 9600-10.
pubmed

Petroutsos D, Tokutsu R, Maruyama S, Flori S, Greiner A, Magneschi L, Cusant L, Kottke T, Mittag M, Egemann P, Finazzi G, Minagawa J (2016) A blue-light photoreceptor mediates the feedback regulation of photosynthesis. Nature 537: 563-6.
pubmed

Wohlgemuth G, Mehta SS, Mejia RF, Neumann S, Pedrosa D, Pluskal T, Schymanski EL, Willighagen EL, Wilson M, Wishart DS, Arita M, Dorrestein PC, Bandeira N, Wang M, Schulze T, Salek RM, Steinbeck C, Nainala VC, Mistrik R, Nishioka T, Fiehn O (2016) SPLASH, a hashed identifier for mass spectra. Nat Biotechnol 34: 1099-101.
pubmed

Shabuer G, Ishida K, Pidot SJ, Roth M, Dahse HM, Hertweck C (2015) Plant pathogenic anaerobic bacteria use aromatic polyketides to access aerobic territory. Science 350: 670-4.
pubmed

Santhanam R, Luu VT, Weinhold A, Goldberg J, Oh Y, Baldwin IT (2015) Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping. PNAS 112: E5013-20
pubmed

Berry D, Mader E, Lee TK, Woebken D, Palatinszky M, Schmid MC, Hanson BT, Wang Y, Zhu D, Schintlmeister A, Wagner M, Shterzer N, Mizrahi I, Rauch I, Decker T, Bocklitz T, Popp J, Gibson CM, Fowler PW, Huang WE (2015) Tracking heavy water (D₂O) incorporation for identifying and sorting active microbial cells. PNAS 112: E194-203.
pubmed

Lange M, Eisenhauer N, Sierra CA, Bessler H, Engels C, Griffiths RI, Mellado-Vázquez PG, Malik AA, Roy J, Scheu S, Steinbeiss S, Thomson BC, Trumbore SE, Gleixner (2015) Plant diversity increases soil microbial activity and soil carbon storage. Nat Commun 6: 6707.
pubmed

Wicker K, Heintzmann R (2014) Resolving a misconception about structured illumination. Nat Photonics 8: 342-4.
pubmed

Bos KI, Harkins KM, Herbig A, Coscolla M, Weber N, Comas I, Forrest SA, Bryant JM, Harris SR, Schuenemann VJ, Campbell TJ, Majander K, Wilbur AK, Guichon RA, Wolfe Steadman DL, Cook DC, Niemann S, Behr MA, Zumarraga M, Bastida R, Huson D, Nieselt K, Young D, Parkhill J, Buikstra JE, Gagneux S, Stone AC, Krause J (2014) Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature 514: 494-7.
pubmed

Press AT, Traeger A, Pietsch C, Mosig A, Wagner M, Jbeily N, Koch N, Gottschaldt M, Ermolayev V, Beziere N, Popp J, Kessels M, Qualmann B, Clemens MG, Ntziachristos V, Schubert US, Bauer M (2014) Cell type-specific delivery of short interfering RNAs by dyefunctionalised theranostic nanoparticles. Nat Commun 5: 5565.
pubmed

Hädrich S, Klenke A, Rothhardt J, Krebs M, Hoffmann A, Pronin O, Pervak V, Limpert J, Tünnermann A (2014). High photon flux table-top coherent extreme-ultraviolet source. Nat Photonics 8: 779-83.

Warinner C, Rodrigues JFM, Vyas R, Trachsel C, Shved N, Grossmann J, Radini A, Hancock Y, Tito RY, Fiddyment S, Speller C, Hendy J, Charlton S, Luder HU, Salazar-García DC, Eppler E, Seiler R, Hansen L, Samaniego Castruita JA, Barkow-Oesterreicher S, Teoh KY, Kelstrup C, Olsen JV, Nanni P, Kawai T, Willerslev E, von Mering C, Lewis Jr. CM, Collins MJ, Gilbert MTP, Rühli F, Cappellini E (2014) Pathogens and host immunity in the ancient human oral cavity. Nat Genet 46: 336-44.
pubmed

Bretschneider T, Heim JB, Heine D, Winkler R, Busch B, Kusebauch B, Stehle T, Zocher G, Hertweck C (2013) Vinylogous chain branching catalyzed by a dedicated polyketide synthase module. Nature 502: 124-8.
pubmed

Schuenemann VJ, Singh P, Mendum TA, Krause-Kyora B, Jäger G, Bos KI, Herbig A, Economou C, Benjak A, Busso P, Nebel A, Boldsen JL, Kjellström A, Wu H, Stewart GR, Taylor GM, Bauer P, Lee OY, Wu HH, Minnikin DE, Besra GS, Tucker K, Roffey S, Sow SO, Cole ST, Nieselt K, Krause J (2013) Genome-wide comparison of medieval and modern Mycobacterium leprae. Science 341: 179-83.
pubmed

Gröschel AH, Walther A, Löbling TI, Schacher FH, Schmalz H, Müller AHE (2013) Guided hierarchical co-assembly of soft patchy nanoparticles. Nature 503: 247-51.
pubmed

Wondraczek L, Batentschuk M, Schmidt MA, Borchardt R, Scheiner S, Seemann B, Schweizer P, Brabec CJ (2013) Solar spectral conversion for improving the photosynthetic activity in algae reactors. Nat Commun 4: 2047.
pubmed

Aimanianda V, Bayry J, Bozza S, Kniemeyer O, Perruccio K, Ramulu Elluru S, Clavaud C, Paris S, Brakhage AA, Kaveri SV, Romani L, Latgé JP (2009) Surface hydrophobin prevents immune recognition of airborne fungal spores. Nature 460: 1117-21.
pubmed