Azemtsop Matanfack G, Taubert M, Guo S, Houhou R, Bocklitz T, Küsel K, Popp J (2020) Influence of  carbon sources on quantification of deuterium incorporation in heterotrophic bacteria: a raman-stable isotope labeling approach. Analytical Chemistry, doi: 10.1021/acs.analchem.0c02443.
pubmed

Hoyos M, Huber M, Förstner KU, Papenfort K (2020) Gene autoregulation by 3' UTR-derived bacterial small RNAs. eLife, doi: 10.7554/eLife.58836.
pubmed

Krespach MKC, García-Altares M, Flak M, Schoeler H, Scherlach K, Netzker T, Schmalzl A, Mattern DJ, Schroeckh V, Komor A, Mittag M, Hertweck C, Brakhage AA (2020) Lichen-like association of Chlamydomonas reinhardtii and Aspergillus nidulas protects algal cells from bacteria. ISME, doi: 10.1038/s41396-020-0731-2.
pubmed

Schmidt F, Thywißen A, Röcker M, Cunha C, Cseresnyés Z, Schmidt H, Galiani S, Gräler MH, Chamilos G, Lacerda JF, Campos AJ, Eggeling C, Figge MT, Heinekamp T, Filler SG, Carvalho A, Brakhage AA (2020) Flotillin-dependent lipid-raft microdomains are required for functional phagolysosomes against fungal infections. Cell Reports, doi: 10.1016/j.celrep.2020.108017.
pubmed

Kohn T, Rast P, Kallschuer N, Wiegand S, Boedeker C, Jetten MSM, Jeske O, Vollmers J, Kaster AK, Rohde M, Jogler M, Jogler C (2020) The microbiome of Posidonia oceania seagrass leaves can be dominated by planctomycetes. Front Microbiol, doi: 10.3389/fmicb.2020.01458.
pubmed

Gao C, Fernandez VI, Lee KS, Fenizia S, Pohnert G, Seymour JR, Raina JB, Stocker R (2020) Single-cell bacterial transcription measurements reveal the importance of dimethylsulfoniopropionate (DMSP) hotspots in ocean sulfur cycling. Nat Commun, doi: 10.1038/s41467-020-15693-z.
pubmed

Huber M, Fröhlich KS, Radmer J, Papenfort K (2020) Switching fatty acid metabolism by an RNA-controlled feed forward loop. PNAS, doi: 10.1073/pnas.1920753117.
pubmed

Heshiki Y, Vazquez-Uribe R, Li Ji, Ni Y, Quainoo S, Imamovic L, Li Ju, Sørensen M, Chow BKC, Weiss GJ, Xu A, Sommer MOA, Panagiotou G (2020) Predictable modulation of cancer treatment outcomes by the gut microbiota. Microbiome, doi: 10.1186/s40168-020-00811-2.
pubmed

Yan L, Herrmann M, Kampe B, Lehmann R, Totsche KU, Küsel K (2020) Environmental selection shapes the formation of near-surface groundwater microbiomes. Water Res, doi: 10.1016/j.watres.2019.115341.
pubmed

Deinhardt-Emmer S, Rennert K, Schicke E, Cseresnyés Z, Windolph M, Nietzsche S, Heller R, Siwczak F, Haupt KF, Carlstedt S, Schacke M, Figge MT, Ehrhardt C, Löffler B, Mosig AS (2020) Co-infection with Staphylococcus aureus after primary influenza virus infection leads to damage of the endothelium in a human alveolus-on-a-chip model. Biofabrication, doi: 10.1088/1758-5090/ab7073.
pubmed

Niehs SP, Dose B, Richter S, Pidot SJ, Dahse HM, Stinear TP, Hertweck C (2020) Mining symbionts of a spider-transmitted fungus illuminates unchartered biosynthetic pathways to cytotoxic benzolactones. Angew Chem Int Ed Engl, doi: 10.1002/anie.201916007.
pubmed

Stroe MC, Netzker T, Scherlach K, Krüger T, Hertweck C, Valiante V, Brakhage AA (2020) Targeted induction of a silent fungal gene cluster encoding the bacteria-specific germination inhibitor fumigermin. eLife, doi: 10.7554/eLife.52541.
pubmed

Vallet M, Baumeister TUH, Kaftan F, Grabe V, Buaya A, Thines M, Svatoš A, Pohnert G (2019) The oomycete Lagenisma coscinodisci hijacks host alkaloid synthesis during infection of a marine diatom. Nat Commun 10: 4938, doi: 10.1038/s41467-019-12908-w.
pubmed

Wondraczek L, Pohnert G, Schacher FH, Köhler A, Gottschaldt M, Schubert US, Küsel K, Brakhage AA (2019) Artificial Microbial Arenas: Materials for Observing and Manipulating Microbial Consortia. Adv Mater: 1900284, doi: 10.1002/adma.201900284.
pubmed

Stappers MHT, Clark AE, Aimanianda V, Bidula S, Reid DM, Asamaphan P, Hardison SE, Dambuza IM, Valsecchi I, Kerscher B, Plato A, Wallace CA, Yuecel R, Hebecker B, da Glória Teixeira Sousa M, Cunha C, Liu Y, Feizi T, Brakhage AA, Kwon-Chung KJ, Gow NAR, Zanda M, Piras M, Zanato C, Jaeger M, Netea MG, van de Veerdonk FL, Lacerda JF, Campos A, Carvalho A, Willment JA, Latgé JP, Brown GD (2018) Recognition of DHN-melanin by a C-type lectin receptor is required for immunity to Aspergillus. Nature 555: 382-6
pubmed

Hermenau R, Ishida K, Gama S, Hoffmann B, Pfeifer-Leeg M, Plass W, Mohr JF, Wichard T, Saluz HP, Hertweck C (2018) Gramibactin is a bacterial siderophore with a diazeniumdiolate ligand system. Nat Chem Biol 14: 841-3.
pubmed

Vågene ÅJ, Herbig A, Campana MG, Robles García NM,  Warinner C, Sabin S, Spyrou MA, Andrades Valtueña A, Huson D, Tuross N, Bos KI, Krause J (2018) Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico. Nat Ecol Evol 2: 520-8.
pubmed

Dunbar KL, Büttner H, Molloy EM, Dell M, Kumpfmüller J, Hertweck C (2018) Genome editing reveals novel thiotemplated assembly of polythioamide antibiotics in anaerobic bacteria. Angew Chem Int Ed 57: 14080-4.
pubmed

Englert C, Nischang I, Bader C, Borchers P, Alex J, Pröhl M, Hentschel M, Hartlieb M, Träger A, Pohnert G, Schubert S, Gottschaldt M, Schubert US (2018) Photocontrolled release of chemicals from nano- and microparticle containers. Angew Chem Int Ed 57: 2479-82.
pubmed

Fritzsche M, Li D, Colin-York H, Chang VT, Moeendarbary E, Felce JH, Sezgin E, Charras G, Betzig E, Eggeling C (2017) Self-organizing actin patterns shape membrane architecture but not cell mechanics. Nat Commun 8: 14347.
pubmed

Aiyar P, Schaeme D, García-Altares M, Carrasco Flores D, Dathe H, Hertweck CH, Sasso S, Mittag G (2017) Antagonistic bacteria disrupt calcium homeostasis and immobilize algal cells. Nat Commun 8: 1756.
pubmed

Bacher P, Heinrich F, Stervbo U, Nienen M, Vahldieck M, Iwert C, Vogt K, Kollet J, Babel N, Sawitzki B, Schwarz C, Beereswill S, Heimesaat M, Heine G, Gadermaier G, Asam C, Assenmacher M, Kniemeyer O, Brakhage AA, Ferreira-Briza F, Wallner M, Worm M, Scheffold A (2016) Regulatory T cell specificity directs tolerance versus allergy against aeroantigens in humans. Cell 167: 1067-78.
pubmed

Beulig F, Urich T, Nowak M, Trumbore SE, Gleixner G, Gilfillan GD, Fjelland KE, Küsel K (2016) Altered carbon turnover processes and microbiomes in soils under long-term extremely high CO2 exposure. Nat Microbiol 1: 15025.
pubmed

Winter S, Jahn K, Wehner S, Kuchenbecker L, Marz M, Stoye J, Böcker S (2016) Finding approximate gene clusters with Gecko 3. Nucleic Acids Res 44: 9600-10.
pubmed

Petroutsos D, Tokutsu R, Maruyama S, Flori S, Greiner A, Magneschi L, Cusant L, Kottke T, Mittag M,  Egemann P, Finazzi G, Minagawa J (2016) A blue-light photoreceptor mediates the feedback regulation of photosynthesis. Nature 537: 563-6.
pubmed

Santhanam R, Luu VT, Weinhold A, Goldberg J, Oh Y, Baldwin IT (2015) Native root-associated bacteria rescue a plant from a sudden-wilt disease that emerged during continuous cropping. PNAS 112: E5013-20
pubmed

Berry D, Mader E, Lee TK, Woebken D, Palatinszky M, Schmid MC, Hanson BT, Wang Y, Zhu D, Schintlmeister A, Wagner M, Shterzer N, Mizrahi I, Rauch I, Decker T, Bocklitz T, Popp J, Gibson CM, Fowler PW, Huang WE (2015) Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells. PNAS 112: E194-203.
pubmed

Bos KI, Harkins KM, Herbig A, Coscolla M, Weber N, Comas I, Forrest SA, Bryant JM, Harris SR, Schuenemann VJ, Campbell TJ, Majander K, Wilbur AK, Guichon RA, Wolfe Steadman DL, Cook DC, Niemann S, Behr MA, Zumarraga M, Bastida R, Huson D, Nieselt K, Young D, Parkhill J, Buikstra JE, Gagneux S, Stone AC, Krause J (2014) Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature 514: 494-7.
pubmed

Press AT, Traeger A, Pietsch C, Mosig A, Wagner M, Jbeily N, Koch N, Gottschaldt M, Ermolayev V, Beziere N, Popp J, Kessels M, Qualmann B, Clemens MG, Ntziachristos V, Schubert US, Bauer M (2014) Cell type-specific delivery of short interfering RNAs by dyefunctionalised theranostic nanoparticles. Nat Commun 5: 5565.
pubmed

Hädrich S, Klenke A, Rothhardt J, Krebs M, Hoffmann A, Pronin O, Pervak V, Limpert J, Tünnermann A (2014). High photon flux table-top coherent extreme-ultraviolet source. Nat Photonics 8: 779-83.

Schuenemann VJ, Singh P, Mendum TA, Krause-Kyora B, Jäger G, Bos KI, Herbig A, Economou C, Benjak A, Busso P, Nebel A, Boldsen JL, Kjellström A, Wu H, Stewart GR, Taylor GM, Bauer P, Lee OY, Wu HH, Minnikin DE, Besra GS, Tucker K, Roffey S, Sow SO, Cole ST, Nieselt K, Krause J (2013) Genome-wide comparison of medieval and modern Mycobacterium leprae. Science 341: 179-83.
pubmed

Gröschel AH, Walther A, Löbling TI, Schacher FH, Schmalz H, Müller AHE (2013) Guided hierarchical co-assembly of soft patchy nanoparticles. Nature 503: 247-51.
pubmed