Publications - Balance of the Microverse

We invite you to also visit Google Scholar to explore the publications on the Microverse. The bolded entries indicate researchers from the Microverse Cluster.

Richter I, Hasan M, Kramer J, Wein P, Krabbe J, Wojtas K, Stinear T, Pidot S, Kloss F, Hertweck C, Lackner G 2024 Deazaflavin metabolite produced by endosymbiotic bacteria controls fungal host reproduction. ISME J 18, wrae074.

Engel N, Hoffmann T, Behrendt F, Liebing P, Weber C, Gottschaldt M, Schubert U 2024 Cryogels Based on Poly(2-oxazoline)s through Development of Bi- and Trifunctional Cross-Linkers Incorporating End Groups with Adjustable Stability. Macromolecules 57, 2915-2927.

Müller R, König A, Groth S, Zarnowski R, Visser C, Handrianz T, Maufrais C, Krüger T, Himmel M, Lee S, Priest E, Yildirim D, Richardson J, Blango M, Bougnoux M, Kniemeyer O, d'Enfert C, Brakhage A, Andes D, Trümper V, Nehls C, Kasper L, Mogavero S, Gutsmann T, Naglik J, Allert S, Hube B 2024 Secretion of the fungal toxin candidalysin is dependent on conserved precursor peptide sequences. Nat Microbiol 9, 669-683.

Liang S, Sircaik S, Dainis J, Kakade P, Penumutchu S, McDonough L, Chen Y, Frazer C, Schille T, Allert S, Elshafee O, Hänel M, Mogavero S, Vaishnava S, Cadwell K, Belenky P, Perez J, Hube B, Ene I, Bennett R 2024 The hyphal-specific toxin candidalysin promotes fungal gut commensalism. Nature 627, 620-627.

Kaden T, Alonso-Roman R, Akbarimoghaddam P, Mosig A, Graf K, Raasch M, Hoffmann B, Figge M, Hube B, Gresnigt M 2024 Modeling of intravenous caspofungin administration using an intestine-on-chip reveals altered Candida albicans microcolonies and pathogenicity. Biomaterials 307, 122525.

Schultz C, Zopf D, Holzinger A, Silge A, Meyer-Zedler T, Schmitt M, Wichard T, Popp J 2024 Raman spectral analysis in the CHx-stretching region as a guiding beacon for non-targeted, disruption-free monitoring of germination and biofilm formation in the green seaweed Ulva. Chemphyschem , e202400173.

Schwickert K, Glitscher M, Bender D, Murra R, Schwickert K, Pfalzgraf S, Schirmeister T, Hellmich U, Hildt E 2024 Zika virus replication is impaired by a selective agonist of the TRPML2 ion channel Antiviral Research , 105940.

Weigel A, Jacob P, Schweinberger W, Huber M, Trubetskov M, Karandušovský P, Hofer C, Buberl T, Amotchkina T, Högner M, Hahner D, Sulzer P, Leitenstorfer A, Pervak V, Krausz F, Pupeza, I 2024 Dual-oscillator infrared electro-optic sampling with attosecond precision Optica 11, 726-735.

Seibold P, Dörner S, Fricke J, Schäfer T, Beemelmanns C, Hoffmeister D 2024 Genetic regulation of L-tryptophan metabolism in Psilocybe mexicana supports psilocybin biosynthesis. Fungal Biol Biotechnol 11, 4.

Bauer M, Ermolaeva M, Singer M, Wetzker R, Soares M 2024 Hormesis as an adaptive response to infection. Trends Mol Med 30, 633-641.

Sharifi S, Chaudhari P, Martirosyan A, Eberhardt A, Witt F, Gollowitzer A, Lange L, Woitzat Y, Okoli E, Li H, Rahnis N, Kirkpatrick J, Werz O, Ori A, Koeberle A, Bierhoff H, Ermolaeva M 2024 Reducing the metabolic burden of rRNA synthesis promotes healthy longevity in Caenorhabditis elegans Nature Communications , 1702.

Li H, Zhang L, Li J, Wu Q, Qian L, He J, Ni Y, Kovatcheva-Datchary P, Yuan R, Liu S, Shen L, Zhang M, Sheng B, Li P, Kang K, Wu L, Fang Q, Long X, Wang X, Li Y, Ye Y, Ye J, Bao Y, Zhao Y, Xu G, Liu X, Panagiotou G, Xu A, Jia W 2024 Resistant starch intake facilitates weight loss in humans by reshaping the gut microbiota. Nat Metab 6, 578-597.

Morabito G, Ryabova A, Valenzano D 2024 Immune aging in annual killifish Immunity & Ageing , 18.

Shankar-Hari M, Calandra T, Soares M, Bauer M, Wiersinga WJ, Prescott HC, Knight JC, Baillie KJ, Bos LDJ, Derde LPG, Finfer S, Hotchkiss RS, Marshall J, Openshaw PJM, Seymour CW, Venet F, Vincent JL, Le Tourneau C, Maitland-van der Zee AH, McInnes IB, van der Poll T 2024 Reframing sepsis immunobiology for translation: towards informative subtyping and targeted immunomodulatory therapies. Lancet Respir Med 12, 323-336.

Kumar NH, Kluever V, Barth E, Krautwurst S, Furlan M, Pelizzola M, Marz M, Fornasiero EF 2024 Comprehensive transcriptome analysis reveals altered mRNA splicing and post-transcriptional changes in the aged mouse brain. Nucleic Acids Res 52, 2865-2885.

Eberhardt N, Santamarina B, Enghardt M, Rohland O, Hussain I, Tannert A, Thieme L, Rubio I, Rödel J, Löffler B, Arndt H, Bauer M, Busch A 2024 The effects of photoactivated ciprofloxacin and bile acids on biofilms on bile duct catheters. Int J Antimicrob Agents 63, 107086.

Loos D, Costa Filho A, Dutilh B, Barber A, Panagiotou G 2024 A global survey of host, aquatic, and soil microbiomes reveals shared abundance and genomic features between bacterial and fungal generalists. Cell Rep 43, 114046.

Sekeresova Kralova J, Donic C, Dassa B, Livyatan I, Jansen P, Ben-Dor S, Fidel L, Trzebanski S, Narunsky-Haziza L, Asraf O, Brenner O, Dafni H, Jona G, Boura-Halfon S, Stettner N, Segal E, Brunke S, Pilpel Y, Straussman R, Zeevi D, Bacher P, Hube B, Shlezinger N, Jung S 2024 Competitive fungal commensalism mitigates candidiasis pathology. J Exp Med 221,

Carrasco Flores D, Hotter V, Vuong T, Hou Y, Bando Y, Scherlach K, Burgunter-Delamare B, Hermenau R, Komor A, Aiyar P, Rose M, Sasso S, Arndt H, Hertweck C, Mittag M 2024 A mutualistic bacterium rescues a green alga from an antagonist Proceedings of the National Academy of Sciences , e2401632121.

Nakajima C, Sawada M, Umeda E, Takagi Y, Nakashima N, Kuboyama K, Kaneko N, Yamamoto S, Nakamura H, Shimada N, Nakamura K, Matsuno K, Uesugi S, Vepřek N, Küllmer F, Nasufović V, Uchiyama H, Nakada M, Otsuka Y, Ito Y, Herranz-Pérez V, García-Verdugo J, Ohno N, Arndt H, Trauner D, Tabata Y, Igarashi M, Sawamoto K 2024 Identification of the growth cone as a probe and driver of neuronal migration in the injured brain Nature Communications , 1877.

Ruhland W, Siemers M, Gerst R, Vogt L, Figge M, Papenfort K, Fröhlich K 2024 The global RNA–RNA interactome of Klebsiella pneumoniae unveils a small RNA regulator of cell division Proceedings of the National Academy of Sciences , e2317322121.

Lucchetti M, Aina K, Grandmougin L, Jäger C, Pérez Escriva P, Letellier E, Mosig A, Wilmes P 2024 An Organ-on-Chip Platform for Simulating Drug Metabolism Along the Gut–Liver Axis Advanced Healthcare Materials , 2303943.

Harnisch F, Deutzmann J, Boto S, Rosenbaum M 2024 Microbial electrosynthesis: opportunities for microbial pure cultures Trends in Biotechnology , 2024.02.004.

Zulfiqar M, Singh V, Steinbeck C, Sorokina M 2024 Review on computer-assisted biosynthetic capacities elucidation to assess metabolic interactions and communication within microbial communities Critical Reviews in Microbiology , 1-40.

Hrovat K, Dutilh B, Medema M, Melkonian C 2024 Taxonomic resolution of different 16S rRNA variable regions varies strongly across plant-associated bacteria ISME Communications , ycae034.

Alonso-Roman R, Mosig A, Figge M, Papenfort K, Eggeling C, Schacher F, Hube B, Gresnigt M 2024 Organ-on-chip models for infectious disease research Nature Microbiology , 891–904.

Giamarellos-Bourboulis E, Aschenbrenner A, Bauer M, Bock C, Calandra T, Gat-Viks I, Kyriazopoulou E, Lupse M, Monneret G, Pickkers P, Schultze J, van der Poll T, van de Veerdonk F, Vlaar A, Weis S, Wiersinga W, Netea M 2024 The pathophysiology of sepsis and precision-medicine-based immunotherapy. Nat Immunol 25, 19-28.

Catalina-Hernández È, López-Martín M, Masnou-Sánchez D, Martins M, Lorenz-Fonfria V, Jiménez-Altayó F, Hellmich U, Inada H, Alcaraz A, Furutani Y, Nonell-Canals A, Vázquez-Ibar J, Domene C, Gaudet R, Perálvarez-Marín A 2024 Experimental and computational biophysics to identify vasodilator drugs targeted at TRPV2 using agonists based on the probenecid scaffold. Comput Struct Biotechnol J 23, 473-482.

Behnke M, Vollrath A, Dahlke P, Páez Larios F, Chi M, Tsarenko E, Jordan P, Weber C, Dirauf M, Czaplewska J, Beringer-Siemers B, Stumpf S, Kellner C, Kretzer C, Hoeppener S, Nischang I, Sierka M, Eggeling C, Werz O, Schubert U 2024 PEtOxylated polyesteramide nanoparticles for the delivery of anti-inflammatory drugs Materials Today Chemistry , 101848.

Dell M, Tran M, Capper M, Sundaram S, Fiedler J, Koehnke J, Hellmich U, Hertweck C 2024 Trapping of a Polyketide Synthase Module after C-C Bond Formation Reveals Transient Acyl Carrier Domain Interactions. Angew Chem Int Ed Engl 63, e202315850.

Huber M, Trubetskov M, Schweinberger W, Jacob P, Zigman M, Krausz F, Pupeza I 2024 Standardized Electric-Field-Resolved Molecular Fingerprinting Analytical Chemistry 96, 13110-13119.

Deng Y, Yu R, Grabe V, Sommermann T, Werner M, Vallet M, Zerfaß C, Werz O, Pohnert G 2024 Bacteria modulate microalgal aging physiology through the induction of extracellular vesicle production to remove harmful metabolites. Nat Microbiol , Epub ahead of print.