Publications - Balance of the Microverse

We invite you to also visit Google Scholar to explore the publications on the Microverse. The bolded entries indicate researchers from the Microverse Cluster.

Our acknowledgement:
Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany's Excellence Strategy – EXC 2051 – Project-ID 390713860.

Koceva H, Amiratashani M, Akbarimoghaddam P, Hoffmann B, Zhurgenbayeva G, Gresnigt MS, Marcelino VR, Eggeling C, Figge MT, Amorim MJ, Mosig AS 2025 Deciphering respiratory viral infections by harnessing organ-on-chip technology to explore the gut-lung axis. Open Biol 15, 240231.

Praetorius JP, Hitzler SUJ, Gresnigt MS, Figge MT 2025 Image-based quantification of Candida albicans filamentation and hyphal length using the open-source visual programming language JIPipe. FEMS Yeast Res ,

Bando Y, Klapper M, Herbst R, Sachse A, Stallforth P, Arndt HD 2025 Semiautomated Total Synthesis of the Cyclic Lipodepsipeptide Anikasin. Org Lett ,

Tröger J, Dahlhaus R, Bayrhammer A, Koch D, Kessels MM, Qualmann B 2025 Mitochondria are positioned at dendritic branch induction sites, a process requiring rhotekin2 and syndapin I. Nat Commun 16, 2353.

Nikitashina V, Bartels B, Mansour JS, LeKieffre C, Decelle J, Hertweck C, Not F, Pohnert G 2025 Metabolic interdependence and rewiring in Radiolaria-microalgae Photosymbioses. ISME J ,

Wasmuth I, Warinner C, Stallforth P 2025 Microbial dynamics and Pseudomonas natural product production in milk and dairy products. Nat Prod Rep ,

Lenić A, Bardl B, Kloss F, Peschel G, Schlembach I, Lackner G, Regestein L, Rosenbaum MA 2025 Pilot Scale Production of a F420 Precursor Under Microaerobic Conditions. Biotechnol J 20, e70002.

Schultz C, Rodewald M, Weidisch A, Meyer-Zedler T, Caffard T, Schmitt M, Matziolis G, Zippelius T, Popp J 2025 4D-Spatiotemporal SHG Imaging for the Analysis of Drug-Induced Changes in the Dura Mater Anal Chem 97, 3892-3900.

Pérez Carrillo VH, Whittaker JJ, Wiedemann C, Harder JM, Lohr T, Jamithireddy AK, Dajka M, Goretzki B, Joseph B, Guskov A, Harmer NJ, Holzgrabe U, Hellmich UA 2025 Structure and Dynamics of Macrophage Infectivity Potentiator Proteins from Pathogenic Bacteria and Protozoans Bound to Fluorinated Pipecolic Acid Inhibitors. J Med Chem ,

Xu LL, McIlroy SE, Ni Y, Guibert I, Chen J, Rocha U, Baker DM, Panagiotou G 2025 Chemical pollution drives taxonomic and functional shifts in marine sediment microbiome, influencing benthic metazoans. ISME Commun 5, ycae141.

Verdon N, Popescu O, Titmuss S, Allen RJ 2025 Habitat fragmentation enhances microbial collective defence. J R Soc Interface 22, 20240611.

Dickmann P, Claus RA, Bauer M 2025 Sepsis after Trauma—Evolving Paradigms in Stress Biology and Host Response Failure Burns & Trauma

Graf M, Sarkar A, Svensson CM, Munser AS, Schröder S, Hengoju S, Rosenbaum MA, Figge MT 2025 Rapid detection of microbial antibiotic susceptibility via deep learning supported analysis of angle-resolved scattered-light images of picoliter droplet cultivations Sensors and Actuators B: Chemical 424, 136866.

Koceva H, Mosig A 2025 Human-Induced Pluripotent Stem Cell-Based Alveolus-on-Chip Model to Study Influenza Virus A Infection. Methods Mol Biol 2890, 225-235.

Wright SS, Kumari P, Fraile-Ágreda V, Wang C, Shivcharan S, Kappelhoff S, Margheritis EG, Matz A, Vasudevan SO, Rubio I, Bauer M, Zhou B, Vanaja SK, Cosentino K, Ruan J, Rathinam VA 2025 Transplantation of gasdermin pores by extracellular vesicles propagates pyroptosis to bystander cells. Cell ,

Velsko IM, Warinner C 2025 Streptococcus abundance and oral site tropism in humans and non-human primates reflects host and lifestyle differences. NPJ Biofilms Microbiomes 11, 19.

Krstić A, Gäbler TB, Jain N, Then P, Gili VF, Saravi S, Setzpfand F, Eggeling C, Gräfe M 2025 Enhancing entangled two-photon absorption of Nile Red via temperature-controlled SPDC APL Quantum 1,

Schroeter SA, Orme AM, Lehmann K, Lehmann R, Chaudhari NM, Küsel K, Wang H, Hildebrandt A, Totsche KU, Trumbore S, Gleixner G 2025 Hydroclimatic extremes threaten groundwater quality and stability. Nat Commun 16, 720.

Brassington PJT, Klefisch FR, Graf B, Pfüller R, Kurzai O, Walther G, Barber AE 2025 Genomic reconstruction of an azole-resistant Candida parapsilosis outbreak and the creation of a multi-locus sequence typing scheme: a retrospective observational and genomic epidemiology study. Lancet Microbe 6, 100949.

Nychas E, Marfil-Sánchez A, Chen X, Mirhakkak M, Li H, Jia W, Xu A, Nielsen HB, Nieuwdorp M, Loomba R, Ni Y, Panagiotou G 2025 Discovery of robust and highly specific microbiome signatures of non-alcoholic fatty liver disease. Microbiome 13, 10.

Hofer C, Bausch D, Fürst L, Wei Z, Högner M, Butler TP, Gebhardt M, Heuermann T, Gaida C, Maiti KS, Huber M, Fill E, Limpert J, Krausz F, Karpowicz N, Pupeza I 2025 Linear field-resolved spectroscopy approaching ultimate detection sensitivity Optics Express 33, 1-17.

Maneira C, Chamas A, Lackner G 2025 Engineering Saccharomyces cerevisiae for medical applications. Microb Cell Fact 24, 12.

Velasco-Gomariz M, Sulzer J, Faber F, Fröhlich KS 2025 An sRNA overexpression library reveals AbnZ as a negative regulator of an essential translocation module in Caulobacter crescentus Nucleic Acids Research gkae1139,

Li K, Cho YI, Tran MA, Wiedemann C, Zhang S, Koweek RS, Hoàng NK, Hamrick GS, Bowen MA, Kokona B, Stallforth P, Beld J, Hellmich UA, Charkoudian LK 2025 Strategic Acyl Carrier Protein Engineering Enables Functional Type II Polyketide Synthase Reconstitution In Vitro. ACS Chem Biol ,

Zhou Z, Kleis L, Depetris-Chauvin A, Jaskulski S, Damerell V, Michels KB, Gigic B, Nöthlings U, Panagiotou G 2025 Beneficial microbiome and diet interplay in early-onset colorectal cancer. EMBO Mol Med ,

Nair A, Doijad SP, Suryavanshi MV, Dey A, Singh Malik SV, Dutilh BE, Barbuddhe SB 2025 Unveiling the Kadaknath Gut Microbiome: Early Growth Phase Spatiotemporal Diversity Microbiology Research 16, 54.